Chen Lab

University of Pittsburgh at Pittsburgh

MISCELLANEOUS

Pittsburgh · United States

NIH-funded
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Research focus

NIH R01 · 2025

Developing a Novel Causal Discovery Framework to Unveil Individualized Cell-Cell Communication Networks

Project Summary/Abstract The overall goal of this study is to develop a computational framework integrating deep learning and causal discovery algorithms to unveil the individualized (or instance-specific) cell-cell communication networks (CCCNs) underlying tissue environment heterogeneity of individual tissue samples. The versatility of this framework allows for studying CCCN among cells in both normal physiological conditions and various disease environments. Differences in cell composition and functional states within individual tissue environments contribute to tissue environment heterogeneity. Due to its complexity, it is a challenging problem to understand how cells in a tissue…

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