Pacesa Lab

University of Zurich

- · Switzerland

ERC-funded
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ERC Starting Grant · 2025

De novo design of modulators for protein-nucleic acid interactions

Protein–nucleic acid (NA) interactions are fundamental to many cellular processes, and their disruption can lead to diseases such as autoimmune disorders and cancer. However, targeting NA-binding proteins with small molecules is difficult due to the “undruggable” nature of their interfaces. Recent advancements in computational protein design and deep learning have created new opportunities for the development of protein-based therapeutics. However, current methods struggle to design proteins that can effectively modulate or mimic the intricate protein-NA interactions directly. While some NA-aware models have been developed, they often underperform due to our limited understanding of…

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